Citation Analysis of Undergraduate Biology Department Honors Papers at the University of Denver

 

By Joseph Kraus and Patricia Fisher

 

Abstract

 

The librarians at the University of Denver have been interested in gathering usage statistics of the libraries collections for many years. We have undertaken this research to see how use of the library has changed over the last several years.  We were particularly interested in seeing if students were citing Internet resources, or if they were solely using traditional book and journal resources.  We wanted to see if students were using more journal sources now that the library has so many electronic index/abstract/

full text databases.  We were also interested in seeing if students were using more recent materials than in previous years.

 

 

What we researched

 

 

At the end of the academic year, undergraduate honors students can present research at a program called the  “Undergraduate Research Symposium.”  Many of the biology students take advantage of this research and presentation opportunity.  Over the years, the Biology Department office has kept a copy of those papers.  We photocopied the bibliographies of 51 biology papers from the most recent three years of the symposium – from 1997, 1998, and 1999.  There were a total of 878 citations.  We then put data into a spreadsheet and evaluated the data.  Before we began this research, we had a certain set of expected results.

 

 

Expected Results

 

·        There would be two to three times as many citations to journal articles as there are to books or chapters.

 

·        About 10% of the citations would be to miscellaneous sources of information.

 

·        The average age of a cited book or chapter would be about twice as old as a cited journal article. 

 

·        There would be an increasing number of cited websites from 1997 to 1999.

 

·        The older websites would have a greater chance of being more difficult to find.  About half of the websites would have been cited incorrectly, changed URLs, changed servers, or simply vanished.

 

·        There would be a small but significant number of citations to traditional sources of information that would be counted as “unknown reports”.  (In other words, there would be a small number of bad citations.)

 

 

Actual Results

 

 

·        There is about two and a half as many citations to journal articles as there are to book or chapters.  (67% to journal articles, and 25% to books or book chapters.)

 

·        About 7% of the citations are to miscellaneous sources of information.

 

·        The average age of a cited book or chapter is only slightly older than the average cited journal article.  (Average age for a cited book is 10.2 years old, and the average age for a cited journal article is 9.26 years old.)

 

·        There was only one cited website in 1997, and there were four cited websites in each of 1998 and 1999.  This is much smaller than we expected.

 

·        The older websites were actually easier to find.  Four of the nine cited websites had been cited incorrectly, changed URLs, changed servers, or simply vanished.

 

·        Of the 878 citations, there were only four marked as “unknown reports”.  Three of those four were bad citations, the fourth was specifically listed as an “unknown report”.)

 

 

Conclusions and Findings

 

 

·        The faculty members that advise the students have quite a bit of influence in the sources that they use for their research.

 

·        The advisors may be preparing their students for graduate level research.  Thus, they want their students to be using traditional print resources.

 

·        We suspect that students use citation tracking to finder older sources of information.  For example, the faculty adviser may give them a paper to read, and the student will use the older sources cited in the paper for further information. 

 

·        Citation tracking may be used more often than electronic databases to find relevant research. 

 

·        Biology students find older research to be just as useful as recently published research.  This is regardless of whether it is a journal article or book resource.

 

 

Here are some of the basic statistics.

 

 

Total Citations

Books

Journals

Misc

Web

878

218

592

59

9

 

 

 

 

 

Percentage of total

25%

67%

7%

1%

 

 

Total Number of Papers

51

 

 

 

Years

Average age of book/chapter citation

10.20

Average age of Journal article citation

9.26

Average age of miscellaneous citation

4.69

 

 

 

 

 

 

 

 

 

 

 


 

 

Web Citations

 

1997

 

http://ulysses.atmos.colostate.edu/sum_form.html

URL works

 

1998

 

http://fonsg3.let.uva.nl:8001/Service/Statistics/Correlation_coefficient.html

URL works

 

http://fonsg3.let.uva.nl:8001/Service/Statistics/RankCorrelation_coefficient.html

URL works

 

http://www.epa.gov/OGWDW/wot/appa.html

URL works

 

http://h20-nwisw.er.usgs.gov/nwis-w/CO – Unable to locate server – no redirect

Searched through USGS website to find – http://waterdata.usgs.gov/nwis-w/CO/

 

1999

 

http://www.stanford.edu/group/Urchins/gametes.html

File not found – Could not find while looking through Stanford’s servers and group pages.

Emailed the cited author to see where it is.

2 typos in the URL – should be http://www.stanford.edu/group/Urchin/gametes.htm

 

http://nadp.sws.uiuc.edu/nadpata/depoRep

File not found – typo in the URL, missing a middle “d” in “nadpdata”. 

I am not sure what the “depoRep” file is.  Emailed their administrator. Annual data can be found here:  http://nadp.sws.uiuc.edu/nadpdata/annualReq.asp?site=Custom156

 

http://www.dna.affrc.go.jp/nakamura-bin/showcodon.cgi?species=Chlamydomonas+reinhardtii+[gbpln]

File not found – when looking around www.dna.affrc.go.jp, I find pointers to:

http://bank.dna.affrc.go.jp/~qxnakamr/CUTG.html

http://www.kazusa.or.jp/codon/ – Can do a search to find:

http://www.kazusa.or.jp/codon/cgi-bin/showcodon.cgi?species=Chlamydomonas+reinhardtii+[gbpln]

 

 http://www.nps.gov/cany/home.htm

 URL works

 

(NOTE: Blue URL’s indicate the URL given in the citation – Red URL’s indicate where the URL can now be found if the original URL contained errors.)

 

References

 

Magrill, Rose Mary and Gloriana St. Clair, “Undergraduate Term Paper Citation Patterns by Disciplines and Level in Course,” Collection Management 12(3/4), 1990, p. 25-56 

 

McGrath, William E., “Relationships Between Hard/Soft, Pure/Applied, and Life/Nonlife Disciplines and Subject Book Use in a University Library,” Information Processing and Management 14(1), 1978, p. 17-28

 

Schmidt, Diane, Elisabeth B. Davis and Ruby Jahr, “Biology Journal Use at an Academic Library: a Comparison of Use Studies,” Serials Review 20(2), Summer, 1994, p. 45-64

 

St. Clair, Gloriana and Rose Mary Magrill, “Undergraduate Term Paper Citations,” College & Research Libraries News, 51(1), January 1990, p. 25-28

 

St. Clair, Gloriana and Rose Mary Magrill, “Undergraduate Use of Four Library Collections: Format and Age of Materials,” Collection Building 11(4), 1992,

p. 2-15

 

 

Appendix (Source data)

 

TITLE

# of Citations

#Books

#Journals

#Misc

#E-res

AgeBooksTotal

AgeBooksAvg

AgeJsTotal

AgeJsAvg

AgeMiscTotal

AgeMiscAvg

1997

 

 

 

 

 

 

 

 

 

 

 

An immunohistochemical analysis of POMC related peptides in the pituitary of the cutthroat trout (Oncorhynchus Clarki); an examination of the hormonal responses to stress.

22

4

17

1

0

35

8.75

189

11.12

2

2.00

Inhibition of p53-mediated apoptosis by sulfated glycoprotein-2 and B-cell leukemia/lymphoma-2

48

9

39

0

0

61

6.78

354

9.08

 

#DIV/0!

Effects of Phosphodiesterase on IGF-1 induced maturation of Xenopus laevis Oocytes

7

1

6

0

0

7

7.00

85

14.17

 

#DIV/0!

Isolation and phylogenetic analysis of Prolactin in Bufo marinus, the Marine Toad

9

4

5

 

 

22

5.50

50

10.00

 

#DIV/0!

Evaluation of wortmannin inhibition of progesterone and IGF-1 stimulated xenopus laevis oocyte maturation

5

0

5

0

0

 

#DIV/0!

12

2.40

 

#DIV/0!

Water relations of engelmann spruce saplings during winter 1996-1997: effects of snowcover and decapitation from roots

8

2

4

2

0

23

11.50

22

5.50

6

3.00

Biogeographic distribution of mitochondria haplotypes among populations of the small-bodied sage grouse

13

1

8

4

0

8

8.00

69

8.63

6

1.50

A novel approach to mtDNA separation from total genomic DNA using agarose gel electrophoresis

12

7

5

0

0

43

6.14

78

15.60

 

#DIV/0!

The effects of cytochalasin J on microfilaments, microtubules, and vinculin, a protein marker for adhesion plaques in PtK1 cells

20

1

19

0

0

3

3.00

129

6.79

 

#DIV/0!

Corticotrope distribution and ACTH levels in the pituitary of the atlantic salmon

10

2

4

4

0

7

3.50

40

10.00

2

0.50

The striking effects of land use practices and Bromus tectorum invasion on phosphorus cycling thorugh cryptobiotic crusts in a desert ecosystem of the Colorado Plateau

26

9

14

3

0

53

5.89

174

12.43

20

6.67

Using differential fluorescent staining to investiage apoptosis and differentiation in tadpole tails

11

7

2

2

0

11

1.57

8

4.00

7

3.50

Using WINWAT to model shoot water contents in high-elevation Picea engelmannii and Abies lasiocarpa during winter

28

11

16

0

1

139

12.64

271

16.94

 

#DIV/0!

The role of microfilaments in the marginal band of avian erythrocytes

18

5

13

0

0

78

15.60

95

7.31

 

#DIV/0!

Computer-aided quantification of cell proliferation in Halvacitate induced liver tumors

5

0

4

1

0

 

#DIV/0!

23

5.75

0

0.00

 

 

 

 

 

 

 

 

 

 

 

 

1998

 

 

 

 

 

 

 

 

 

 

 

Identification of a novel insect P450 with homology to mammaliam nifedipine oxidase

15

4

11

 

 

12

3.00

76

6.91

 

#DIV/0!

Characterization of a cross hybridizing region of the avian sex chromosomes

22

1

21

 

 

9

9.00

145

6.90

 

#DIV/0!

Analyzing rapid changes in gene sequences: cloning of a POMC cDNA from the pituitary of the neoteleost fish, Oreochromis mossambicus

9

1

8

 

 

4

4.00

77

9.63

 

#DIV/0!

Avian species richness in urban cattail wetlands: effects of wetland size, shape and hydrology

10

3

6

1

 

20

6.67

76

12.67

1

1.00

Scientific thinking skills in science majors and non-science majors at the university of denver

7

5

2

 

 

74

14.80

19

9.50

 

#DIV/0!

The theory of tensegrity in relation to the architecture of the cell and mitosis

10

1

9

 

 

0

0.00

71

7.89

 

#DIV/0!

Effects of the fertilization envelope on early locomotory development

10

3

1

6

 

87

29.00

27

27.00

41

6.83

Winter photosynthesis of bristlecone pine

11

3

7

 

1

21

7.00

85

12.14

 

#DIV/0!

The isolation of female specific avian DNA

12

1

9

2

 

11

11.00

55

6.11

4

2.00

An analysis of plant communities on Mt. Goliath, Colorado using fuzzy set ordination

12

7

4

0

1

81

11.57

43

10.75

 

#DIV/0!

Expression of mitochondrial cytochrome P450 12B1 during the developmental stages of Drosophila acanthoptera

46

11

35

 

 

93

8.45

266

7.60

 

#DIV/0!

Exploring the value and potential of phylogenetic trees constructed from prolactin amino acid sequences

11

7

4

 

 

62

8.86

22

5.50

 

#DIV/0!

Interactions of cytoskeletal filaments

14

5

8

1

 

26

5.20

46

5.75

0

0.00

An investigation of the effects of pituitary hormone priming on the mRNA in Xenopus laevis oocytes

6

0

6

 

 

 

#DIV/0!

55

9.17

 

#DIV/0!

A comparison of first-year wellness house residents and first-year residence hall residence using techniques in exercise physiology

18

8

8

2

 

63

7.88

146

18.25

2

1.00

Mobile tree islands effects on soil nutrients in alpine ecosystems

32

15

16

1

 

147

9.80

188

11.75

18

18.00

Effects of mining pollution on the breeding distribution and density of the american dipper, Cinclus mexicanus

24

6

10

6

2

59

9.83

72

7.20

72

12.00

 

 

 

 

 

 

 

 

 

 

 

 

1999

 

 

 

 

 

 

 

 

 

 

 

Ecology of sea urchin early development: oxygen dependence

20

11

4

5

 

176

16.00

44

11.00

15

3.75

Cytochalasin J reduces anti-Dynein staining in PtK1 cells

30

2

28

 

 

15

7.50

173

6.18

 

#DIV/0!

Cloning of a 3'RACE product of Polypterus senegalis

28

2

26

 

 

23

11.50

313

12.04

 

#DIV/0!

Can polypeptide hormone sequences be used for phylogenetic studies: an analysis of the growth hormone/prolactin/somatolactin gene family

26

3

23

 

 

50

16.67

118

5.13

 

#DIV/0!

Characterization of a proenkephalin gene duplication : a model for neuropeptide evolution

14

3

11

 

 

49

16.33

145

13.18

 

#DIV/0!

Co-localization of serotonin-like immunoreactivity with synaptic proteins in taste buds of the rat

23

2

20

1

 

40

20.00

122

6.10

0

0

Science reasoning skills and attitudes about science in univeristy of denver faculty

9

5

3

1

 

44

8.80

35

11.67

1

1

The isolation and characterization of a novel cytochrome P450

34

6

28

 

 

73

12.17

258

9.21

 

#DIV/0!

Krummholz vegetation and nutrient composition are spatially distributed: results from two alpine sites in Colorado

19

4

13

2

 

42

10.50

106

8.15

20

10

Marine bacteriology and the role of the fertilization envelope as a physical barrier to contamination in Strongylocentrotus purpuratus

14

6

 

7

1

91

15.17

 

#DIV/0!

17

2.428571

Proenkephalin cDNA in the brain of the ray-finned fish Polypterus senegalus

10

3

7

 

 

44

14.67

94

13.43

 

#DIV/0!

Analysis of the phosphodiesterase mRNA levels in responsive and nonresponsive Xenopus laevis oocytes

7

0

7

 

 

 

#DIV/0!

58

8.29

 

#DIV/0!

The effects of varying nitrogen levels on cryptobiotic soil crusts

18

4

10

3

1

52

13.00

118

11.80

13

4.333333

The allometric relationships of Stipa comata and Hilaria jamesii and their relevance to non-destructive sampling in Canyonlands National Park

8

2

6

 

 

16

8.00

45

7.50

 

#DIV/0!

A PCR-based cloning of Chlamydomonas reinhardtii Hydrogenase: biotechnology for the future of energy production

21

3

17

 

1

134

44.67

211

12.41

 

#DIV/0!

Optimizing expression of an insect cytochrome P450 gene in Escherichia coli

29

5

24

 

 

27

5.40

267

11.13

 

#DIV/0!

Effects of nocodazole and taxol on cytoskeletal filaments

29

6

22

1

 

31

5.17

173

7.86

 

0

Potassium as a limiting nutrient for germination and production of cheatgrass (Bromus tectorum) in the Canyonlands National Park, Utah

15

6

5

3

1

48

8.00

84

16.80

30

10

Effects of retinoic acid on Axolotl taste bud development from oropharyngeal endoderm

13

1

12

 

 

10

10.00

48

4.00

 

#REF!

Total Numbers

878

218

592

59

9

2224

10.20

5480

9.26

277

4.69

Total Percentages

 

24.83%

67.43%

6.72%

1.03%

 

 

 

 

 

 

 

 

books

journals

misc

web